Practical course of phylogenomic methods focused on Hyb-Seq NGS method. The Hyb-Seq method combines target enrichment and genome skimming of the genome. The course covers the theory, discussion of the newest papers from the field, probe design, laboratory and computer part. Several methodological approaches to data analysis, from raw data to species tree analysis, are demonstrated within the course. The lab part includes NGS library preparation (using sonicator) and enrichment.
Course will take time from 10th to 18th June 2024, see https://botany.natur.cuni.cz/fer/hybseqcourse/
With updated HybPiper and related scripts (mine part).
- SIS: https://is.cuni.cz/studium/eng/predmety/index.php?do=predmet&kod=MB120C…
- Materials: https://botany.natur.cuni.cz/fer/hybseqcourse/
- Source data for my part of the course: https://github.com/V-Z/hybseq-course
