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By vojta, 8 December, 2014

Course of work with molecular data in R 2015

Since academic year 2015/16 is the course scheduled in SIS as MB120C16.

Články
Phylogeny
Phylogeography
Population genetics
Faculty of Science, Charles University
R
Taxonomy
Science, research, biology
Teaching
By vojta, 8 December, 2014

Course of work in Linux command line not only for MetaCentrum 2015

Since academic year 2015/16 is the course scheduled in SIS as MB120C17.

Články
Linux (and another software)
openSUSE
Faculty of Science, Charles University
Science, research, biology
Teaching
By vojta, 8 October, 2014

Structure, R and Linux

Structure is very popular software for revealing population structure. Here I describe easy workflow how to run independent runs of Structure in parallel to speed up whole process using statistical software R and how to facilitate use of CLUMPP and distruct with easy BASH scripts.

Články
Linux (and another software)
Population genetics
R
Science, research, biology
By vojta, 1 July, 2014

Arlequin and R under Linux

Arlequin is very popular tool for population genetics and in recent version (3.5) it has version running on Linux (arlecore, only computational core without GUI) as well as possibility to parse output using R statistical language. Those two features are described only briefly in official manual. I faced some issues when running Arlequin on Linux and parsing output using R. I'm describing here my solutions in case someone else would hava similar needs and problems.

Články
Linux (and another software)
Population genetics
Faculty of Science, Charles University
R
Science, research, biology
By vojta, 3 January, 2014

PF 2014

Pour féliciter 2014! Hlavně se na svých cestách neztraťte! Don't get lost on Your journeys!

Vojta

Články
Others
By vojta, 2 January, 2013

PF 2013

Hodně štěstí na Vašich cestách! Have a pleasant & safe journeys! Bon voyages! Feliz viajes!
Vojta

Články
Others
By vojta, 26 December, 2011

Pour féliciter 2012

Pour bonnes voyages! Přes překážky ke hvězdám!

PF 2012

Galeria.

Články
Others
By vojta, 8 October, 2009

Master thesis Phylogeography and dispersal of Nuphar lutea

Phylogeographical studies of aquatic plants are relatively rare, although river corridors are amazing study system. There are many questions about dispersal within river catchment and between different river basins.

Články
Phylogeography
Linux (and another software)
Population genetics
Faculty of Science, Charles University
Nuphar lutea
Science, research, biology
By vojta, 28 January, 2009

The most clever guy

Amuse reading highly intelligent speaches of former president of USA. I took the picture during my stay in USA in summer 2006. Bush's speaches

Články
Rubbish
Opinions
By vojta, 7 May, 2008

Conferention Plant Population Biology 2008

May 1 to 3 2008 I was on conferention Plant Population Biology for the coming decade (21th Annual Conference of the Plant Population Biology Section of the Ecological Society of Germany, Switzerland and Austria (GfÖ), Organized by the Department of Population Biology, Musée national d'histoire naturelle). I presented my poster about preliminary result of phylogeography of Nuphar lutea (yellow water lily) in Czechia.

Články
Ecology
Phylogeography
Opinions
Population genetics
Faculty of Science, Charles University
Nuphar lutea
Science, research, biology

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This work by Vojtěch Zeisek is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.

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